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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621609 chr22:33347552 A/G C22orf32 chr22:42475699-42480287:+ 0.51 7.37 7.74E-13 Box Plot
THCA rs9621609 chr22:33347552 A/G C22orf39 chr22:19338891-19435755:- 0.67 8.54 1.76E-16 Box Plot
THCA rs9621609 chr22:33347552 A/G C22orf40 chr22:46639911-46646193:- 0.61 9.45 1.52E-19 Box Plot
THCA rs9621609 chr22:33347552 A/G C22orf46 chr22:42084943-42094140:+ 0.8 8.15 3.21E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G CABIN1 chr22:24407642-24574596:+ 0.62 8.35 7.68E-16 Box Plot
THCA rs9621609 chr22:33347552 A/G CBX6 chr22:39257455-39268319:- 0.36 6.48 2.25E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G CBY1 chr22:39052641-39069859:+ 0.66 9.21 1.03E-18 Box Plot
THCA rs9621609 chr22:33347552 A/G CCDC117 chr22:29168662-29185289:+ 0.63 8.21 2.04E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G CCDC134 chr22:42196683-42222303:+ 0.6 6.27 8.2E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G CCDC157 chr22:30752624-30774647:+ 0.48 6.79 3.28E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G CECR5 chr22:17618401-17646158:- 0.62 7.72 6.65E-14 Box Plot
THCA rs9621609 chr22:33347552 A/G CHADL chr22:41625514-41636938:- 0.49 6.76 3.93E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G CHEK2 chr22:29083731-29138410:- 0.44 6.27 8.16E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G CRKL chr22:21271714-21308037:+ 0.72 8.72 4.5E-17 Box Plot
THCA rs9621609 chr22:33347552 A/G CSNK1E chr22:38686697-38714089:- 0.49 7.22 2.08E-12 Box Plot